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AD An acronym referring to the group of dis-
eases known collectively as Autoimmune
Disorders. These include diseases such as
multiple sclerosis, lupus, rheumatoid arthritis,
etc. See also 
AUTOIMMUNE DISEASE
,
MULTIPLE
SCLEROSIS
,
LUPUS
.
Adaptation Refers to the adjustment of a pop-
ulation of organisms to a changed environ-
ment. For example, during the 19th century,
the Industrial Revolution caused large black
soot deposits on the white bark of certain trees
in England. The change in environment
resulted in adaptation (e.g., via selective
breeding) of a particular indigenous moth pop-
ulation, consisting of a mixture of all-white
and all-black members. Because the soot
blackened the formerly white bark of the trees
on which the moths rested, predatory birds
were able to easily catch and eat the all-white
members of the population. Thus, there were
fewer all-white moths present in the breeding
population, and a preponderance of all-black
members. During the 20th century, antipollu-
tion efforts in England resulted in a cessation
of the airborne soot and the return of tree bark
to its original white color. Because the preda-
tory birds were now able to catch and eat the
all-black members of that moth population
more easily, the proportion of all-black and
all-white moths in the breeding population
once again changed. See also 
ORGANISM
.
Adaptive Enzymes See
INDUCIBLE ENZYMES
.
ADBF See
AZUROPHIL
-
DERIVED BACTERICIDAL
FACTOR
 (
ADBF
).
Additive Genes Genes that interact but do not
show dominance (in the case of alleles) or
epistasis (if they are not alleles). See also
GENE
,
ALLELE
,
DOMINANT ALLELE
,
EPISTASIS
.
Adenylate Cyclase The enzyme (within cells)
that catalyzes the synthesis (manufacture) of
cyclic AMP. See also 
CYCLIC AMP
.
Adenine A purine base, 6-aminopurine, occur-
ring in ribonucleic acid (RNA) as well as in
deoxyribonucleic acid (DNA) and a compo-
nent of adenosine diphosphate (ADP) and
adenosine triphosphate (ATP). Adenine pairs
with thymine in DNA and uracil in RNA.
See also 
BASE
  (
NUCLEOTIDE
),
BASE PAIR
  (
bp
),
RIBONUCLEIC ACID
  (
RNA
),
DEOXYRIBONUCLEIC
ACID
 (
DNA
).
Adenosine Diphosphate (ADP) A ribonucleo-
side 5
′-diphosphate serving as phosphate-
group acceptor in the cell energy cycle. See
© 2002 by CRC Press LLC

A
also
CATABOLISM
,
ADENOSINE TRIPHOSPHATE
(
ATP
),
ADENOSINE MONOPHOSPHATE
 (
AMP
).
Adenosine Monophosphate (AMP) A ribo-
nucleoside 5
′-monophosphate that is formed
by hydrolysis of ATP or ADP. See also
HYDROLYSIS
,
ADENOSINE DIPHOSPHATE
  (
ADP
),
ADENOSINE TRIPHOSPHATE
 (
ATP
).
Adenosine Triphosphate (ATP) The major
carrier of chemical energy in the cells of all
living things on this planet. A ribonucleoside
5
′-triphosphate functioning as a phosphate-
group donor in the energy cycle of the cell,
ATP contains three phosphate/oxygen mol-
ecules linked together. When a phosphate-
phosphate bond in ATP is broken (hydro-
lyzed), the energy produced can be used by
the cell to carry out its functions. Thus, ATP
serves as the universal medium of biological
energy storage and exchange in living cells.
See also 
ATP
ase
,
ATP SYNTHETASE
,
HYDROLYSIS
,
CYCLIC PHOTOPHOSPHORYLATION
,
BIOLUMINES-
CENCE
,
ATP SYNTHASE
,
ADENOSINE MONOPHOS-
PHATE
 (
AMP
).
Adenovirus A type of virus that can infect
humans. As with all viruses, it can reproduce
only inside living cells (of other host, organ-
isms). Adenovirus causes manufacture of a
protein (metabolite) that disables the p53
gene. Because the p53 gene then cannot per-
form its usual function (i.e., prevention of
uncontrolled cell growth caused by
virus/DNA damage), the adenovirus takes
over and causes the cell to make numerous
copies of the virus until the cell dies, thus
releasing the virus copies into the body of
the host organism to cause further infection.
See also 
VIRUS
,
RETROVIRUSES
,
GENE DELIVERY
,
GENE THERAPY
,
CELL
,
PROTEIN
,
p53
GENE
,
DEOXY-
RIBONUCLEIC ACID
 (
DNA
).
Adhesion Molecule From the Latin adhaerere,
to stick to, the term adhesion molecule refers
to a glycoprotein (oligosaccharide) molecu-
lar chain that protrudes from the surface
membrane of certain cells, causing cells pos-
sessing matching adhesion molecules to
adhere to each other. For example, in 1952
Aaron Moscona observed that (harvesting
enzyme-separated) chicken embryo cells did
not remain separated, but instead coalesced
again into an (embryo) aggregate. In 1955,
Philip Townes and Johannes Holtfreter
showed that like amphibian (e.g., frog) neu-
ron cells will rejoin after being physically
separated (e.g., with a knife blade); but
unlike cells remain segregated (apart).
Adhesion molecules also play a crucial
role in guiding monocytes to sources of
infection (e.g., pathogens) because adhesion
molecules in the walls of blood vessels (after
activation caused by pathogen invasion of
adjacent tissue) adhere to like adhesion mol-
ecules in the membranes of monocytes in the
blood. The monocytes pass through the
blood vessel walls, become macrophages,
and fight the pathogen infection (e.g., trig-
gering tissue inflammation, etc.). See also
OLIGOSACCHARIDES
,
MONOCYTES
,
MACROPHAGE
,
POLYPEPTIDE
  (
PROTEIN
),
CELL
,
PATHOGEN
,
CD
4
PROTEIN
,
CD
44
PROTEIN
,
GP
120
PROTEIN
,
VAGINO-
SIS
,
HARVESTING ENZYMES
,
HARVESTING
,
SIGNAL
TRANSDUCTION
,
SELECTINS
,
LECTINS
,
GLYCOPRO-
TEINS
,
SUGAR MOLECULES
,
LEUKOCYTES
,
LYM-
P H O C Y T E S
,
N E U T R O P H I L S
,
E N D O T H E L I U M
,
ENDOTHELIAL CELLS
,
P
-
SELECTIN
,
ELAM
-
1
,
INTE-
GRINS
,
CYTOKINES
.
Adhesion Protein See
ADHESION MOLECULE
,
ENDOTHELIAL CELLS
.
Adipocytes Specialized cells within an organ-
ism’s lymphatic system that store the triacyl-
g l y c e r o l s   ( a l s o   s o m e t i m e s   c a l l e d
triglycerides) after digestion of those fats,
later releasing fatty acids and glycerol into
the bloodstream when needed by the organ-
ism. See also 
CELL
,
TRIGLYCERIDES
,
FATTY
ACID
,
DIGESTION
 (
within organism
),
FATS
.
Adipose Refers to energy storage tissues con-
sisting of fat molecules within some animals.
Adipose tissue tends to increase if an animal
consumes more energy-containing food than
needed for its level of energy expenditure
(e.g., via exercise). In humans older than 40,
an increase in the body’s adipose tissue is
correlated with an increased risk of prema-
ture death (e.g., from coronary heart dis-
ease). See also 
FATS
,
CORONARY HEART DISEASE
(
CHD
),
LEPTIN
.
Adjuvant (to a herbicide) Any compound
that enhances the effectiveness (i.e., weed-
killing ability) of a given herbicide. For
example, adjuvants such as surfactants can
© 2002 by CRC Press LLC

A
be mixed (prior to application to weeds) with
herbicide (in water), in order to hasten trans-
port of the herbicide’s active ingredient into
the weed plant. That is because the herbicide
must move from an aqueous (water) envi-
ronment into one (i.e., the weed plant’s cuti-
cle or “skin”) comprised of lipids/lipophilic
molecules, before it can accomplish its task.
See also 
SURFACTANT
,
LIPIDS
,
LIPOPHILIC
.
Adjuvant (to a pharmaceutical) Any com-
pound that enhances the desired response by
the body to that pharmaceutical. For example,
adjuvants such as certain polysaccharides or
surface-modified diamond nanoparticles, can
be injected along with (vaccine) antigen in
order to increase the immune response (e.g.,
production of antibodies) to a given antigen.
Another example is that consumption of
grapefruit juice by humans will increase the
impact of certain pharmaceuticals. Those
pharmaceuticals include some sedatives,
antihypertensives, the antihistamine terfena-
dine, and the immunosuppressant cyclospo-
rine. The adjuvant effect of grapefruit juice
is thought to be caused via inhibition of the
enzyme cytochrome P4503A4, which cata-
lyzes reactions involved in the metabolism
(breakdown) of those pharmaceuticals.
Another example is that consumption of
the pharmaceutical known as clopidogrel
(commercial name Plavix) by people imme-
diately following a mild heart attack (severe
chest pain) — along with aspirin — greatly
reduces the risk of death, strokes, and (new,
additional) heart attacks, versus taking aspi-
rin alone after a mild heart attack. See also
CELLULAR IMMUNE RESPONSE
,
HUMORAL IMMU-
NITY
,
POLYSACCHARIDES
,
NANOTECHNOLOGY
,
ANTIGEN
,
ANTIBODY
,
ENZYME
,
METABOLISM
,
HIS-
TAMINE
,
CYCLOSPORINE
,
CYTOCHROME P
4503
A
4
.
ADME Acronym for Absorption, Distribution
(within the body), Metabolism, and Elimi-
nation of pharmaceuticals. See also 
ADME
TESTS
,
IN SILICO SCREENING
.
ADME Tests Refers to Absorption, Distribu-
tion (within the body), Metabolism, and Elim-
ination tests required by the U.S. Food and
Drug Administration (FDA) for approval of
new pharmaceuticals or new food ingredients.
See also 
FOOD AND DRUG ADMINISTRATION
(
FDA
),
ABSORPTION
,
METABOLISM
,
INTERMEDIARY
METABOLISM
,
PHARMACOKINETICS
,
PHARMACOGE-
NOMICS
,
CODEX ALIMENTARIUS COMMISSION
,
ADME
,
ADMET
,
IN SILICO SCREENING
.
ADMET Acronym for Absorption, Distribu-
tion (within the body), Metabolism, Elimi-
nation, Toxicity of pharmaceuticals. See also
ADME TESTING
,
IN SILICO TESTING
.
Adoptive Cellular Therapy The increase in
immune response that is achieved by selec-
tively removing certain immune system cells
from a (patient’s) body, multiplying them
in vitro outside the body to increase their
number greatly, then reinserting those (more
numerous) immune system cells into the
same body. See also 
CELLULAR IMMUNE
RESPONSE
,
CELL CULTURE
,
IN VITRO
,
GENE DELIV-
ERY
,
GENE THERAPY
,
EX VIVO
 (
THERAPY
).
Adoptive Immunization The transfer of an
immune state from one animal to another by
means of lymphocyte transfusions. See also
LYMPHOCYTE
.
ADP See
ADENOSINE DIPHOSPHATE
 (
ADP
).
Adventitious From the Latin adventitius, not
properly belonging to. The term can be uti-
lized to refer to: plant shoots emanating from
sites other than typical ones (e.g., from a
plant’s leaves); a small amount of transgenic
grain accidentally mixed into other grain.
See also 
TRANSGENIC
.
Aerobe An organism that requires oxygen to
live (respire).
Aerobic Exposed to air or oxygen. An oxygen-
ated environment.
Affinity Chromatography A method of sepa-
rating a mixture of proteins or nucleic acids
(molecules) by specific interactions of those
molecules with a component known as a
ligand, which is immobilized on a support. If
a solution of, say, a mixture of proteins is
passed over (through) the column, one of the
proteins binds to the ligand on the basis of
specificity and high affinity (they fit together
like a lock and key). The other proteins in the
solution wash through the column because
they were not able to bind to the ligand. Once
the column is devoid of the other proteins, an
appropriate wash solution is passed through
the column, which causes the protein/ligand
complex to dissociate. The protein is subse-
quently collected in a highly purified form.
See also 
CHROMATOGRAPHY
,
PROTEIN
,
NUCLEIC
© 2002 by CRC Press LLC

A
ACIDS
,
ANTIBODY AFFINITY CHROMATOGRAPHY
,
LIGAND
 (
IN CHROMATOGRAPHY
).
Aflatoxin The term that is used to refer to a
group of related mycotoxins (i.e., metabo-
lites produced by fungi that are toxic to ani-
mals and humans) produced by some strains
Aspergillus flavus and Aspergillus parasiticus,
common fungi that typically live on decay-
ing vegetation. Corn earworm (Helicoverpa
zea) and European corn borer (Ostrinia
nubilalis) are vectors (carriers) of Aspergil-
lus flavus. Aflatoxin B1 is the most com-
monly occurring aflatoxin and one of the
most potent carcinogens known to man.
When dairy cattle eat aflatoxin-contami-
nated feed, their metabolism process con-
verts the aflatoxin (e.g., Aflatoxin B1) into
the mycotoxins known as Aflatoxin M1 and
Aflatoxin M2, which soon appear in the milk
produced. Consumption of aflatoxins by
humans can also result in acute liver damage.
See also 
CARCINOGEN
,
TOXIN
,
FUNGUS
,
MYCO-
TOXINS
,
STRESS PROTEINS
,
LIPOXYGENASE
 (
LOX
),
PEROXIDASE
,
HELICOVERPA ZEA
  (
H
.
zea
),
BETA
CAROTENE
,
OH
43
,
BRIGHT GREENISH
-
YELLOW
FLUORESCENCE
  (
BGYF
),
CORN
,
EUROPEAN CORN
BORER
 (
ECB
).
AFLP Acronym for Amplified Fragment
Length Polymorphism. See also 
AMPLIFIED
FRAGMENT LENGTH POLYMORPHISM
.
Agar A complex mixture of polysaccharides
obtained from marine red algae. It is also
called agar-agar. Agar is used as an emulsion
stabilizer in foods, as a sizing agent in fab-
rics, and as a solid substrate for the labora-
tory culture of microorganisms. Agar melts
at 100°C (212°F), and when cooled below
44°C (123°F) forms a stiff and transparent
gel. Microorganisms are seeded onto and
grown (in the laboratory) on the surface of
the gel. See also 
POLYSACCHARIDES
,
CULTURE
MEDIUM
.
Agarose A highly purified form of agar used
as a stationary phase (substrate) in some
chromatography and electrophoretic methods.
See also 
CHROMATOGRAPHY
,
ELECTROPHORESIS
,
AGAR
.
Aging The process, affecting organisms and
most cells, whereby each cell division (mito-
sis) brings that cell (or organism composed
of such cells) closer to its final cell division
(i.e., death). Notable exceptions to this aging
process include cancerous cells (e.g., myelo-
mas) and the single-celled organism; both of
which are “immortal.” See also 
TELOMERES
,
MITOSIS
,
HYBRIDOMA
,
MYELOMA
,
CANCER
.
Aglycon A nonsugar component of a glyco-
side. See also 
GLYCOSIDE
.
Aglycone The biologically active (molecular)
form of molecules of isoflavones. See also
ISOFLAVONES
,
BIOLOGICAL ACTIVITY
.
Agonists Small protein or organic molecules
that bind to certain cell proteins (i.e., recep-
tors) at a site that is adjacent to the cell’s
“docking” site of protein hormones, neu-
rotransmitters, etc. (i.e., receptor) to induce
a conformational change in that cell protein,
thereby enhancing its activity (i.e., effect
upon the cell). See also 
RECEPTORS
,
ACTIVE
SITE
,
CONFORMATION
,
CELL
,
HORMONE
,
ANTAGO-
NISTS
,
NEUROTRANSMITTER
.
Agraceutical See
NUTRACEUTICAL
,
PHYTOCHEM-
ICAL
.
Agrobacterium tumefaciens A   n a t u r a l l y
occurring bacterium that is capable of insert-
ing its DNA (genetic information) into
plants, resulting in a type of injury to the
plant known as crown gall. In 1980, Marc
van Montagu showed that Agrobacterium
tumefaciens could alter the DNA of its host
plant(s) by inserting its own (“foreign”)
DNA into the genome of the host plants
(thereby opening the way for scientists to
insert virtually any foreign genes into plants
via use of A. tumefaciens). In 1983, Luis
Herrera-Estrella created the first man-made
transgenic plant by inserting an antibiotic-
resistant gene into a tobacco plant. During
2000, Weija Zhou and Richard Vierling
proved that A. tumefaciens is at least
10 times more effective (i.e., at “infecting”
plants to insert DNA) in space (i.e., weight-
lessness/microgravity) than it is when on the
surface of the Earth. Among others, Mon-
santo Company has developed a way to stop
A. tumefaciens from causing crown gall,
while maintaining its ability to insert DNA
into plant cells, and now uses A. tumefaciens
as a vehicle to insert desired genes into crop
plants (e.g., the gene causing high production
of CP4 EPSP synthase, thus conferring resis-
tance to glyphosate-containing herbicide).
© 2002 by CRC Press LLC

A
See also 
BACTERIA
,
DEOXYRIBONUCLEIC ACID
(
DNA
),
INFORMATIONAL MOLECULES
,
GENOME
,
TRANSGENIC
  (
ORGANISM
),
PROTOPLAST
,
EPSP
SYNTHASE
,
CP
4
EPSPS
, “
SHOTGUN

METHOD
,
BIOLISTIC
®
GENE GUN
,
WHISKERS

,
GENETIC
ENGINEERING
,
GENE
,
BIOSEEDS
,
GLYPHOSATE
,
GLYPHOSATE
-
TRIMESIUM
,
GLYPHOSATE ISOPRO-
PYLAMINE SALT
,
NOS TERMINATOR
.
AHG Antihemophilic Globulin. Also known as
FACTOR VIII or Antihemophilic Factor VIII.
See also 
FACTOR VIII
,
GAMMA GLOBULIN
.
AIDS See
ACQUIRED IMMUNE DEFICIENCY SYN-
DROME
 (
AIDS
).
Alanine (ala) A nonessential amino acid of
the pyruvic acid family. In its dry, bulk form
it appears as a white crystalline solid. See
also
ESSENTIAL AMINO ACIDS
.
Albumin A protein that the liver synthesizes
(manufactures). Most minerals and hor-
mones utilized by the human body are first
“attached” to a molecule of albumin before
they are transported in the bloodstream to
where they are needed in the body. See also
PROTEIN
,
HORMONE
,
SUPERCRITICAL CARBON
DIOXIDE
.
ALCAR Acronym for Acetyl-L-Carnitine. See
also
ACETYL CARNITINE
.
Aldose A simple sugar in which the carbonyl
carbon atom is at one end of the carbon
chain. A class of monosaccharide sugars; the
molecule contains an aldehyde group. See
also
MONOSACCHARIDES
.
Aleurone The layer (“skin”) that covers the
endosperm portion of a plant seed. See also
ENDOSPERM
.
AlfAFP Acronym for Alfalfa Antifungal Pep-
tide. See also 
DEFENSINS
.
Algae A heterogeneous (widely varying) group
of photosynthetic plants, ranging from micro-
scopic single-cell forms to multicellular, very
large forms such as seaweed. All of them con-
tain chlorophyll and hence most are green,
but some may be different colors due to the
presence of other, overshadowing pigments.
Alicin A compound that is produced naturally
by the garlic plant when the cells within garlic
bulbs are broken open (e.g., during food prep-
aration or consumption). Enzymes present
within those garlic cells convert (precursor
compound) to alicin. Research indicates that
human consumption of alicin confers some
specific health benefits (anti-thrombotic,
reduce blood cholesterol levels, reduce/avoid
coronary heart disease, enhance the immune
system, etc.). See also 
CELL
,
PHYTOCHEMICALS
,
ENZYME
,
THROMBOSIS
,
CORONARY HEART DISEASE
(
CHD
),
CHOLESTEROL
.
Alkaline Hydrolysis A chemical method of
liberating DNA from a DNA-RNA hybrid.
See also 
HYDROLYSIS
,
RIBONUCLEIC ACID
 (
RNA
),
DNA
-
RNA HYBRID
,
DEOXYRIBONUCLEIC ACID
(
DNA
).
Alkaloids A class of toxic compounds that are
naturally produced by some organisms (e.g.,
ants, certain plants such as lupines, and cer-
tain fungi such as ergot). For example, cer-
tain species of ants naturally produce
alkaloids, as a self-defense mechanism. Poi-
son-dart frogs (Dendrobates azureus) and
two species of New Guinea songbirds (Pito-
hui dichrous and Ifrita kowaldi) can tolerate
those ant-produced alkaloids, so they also
acquire that self-defense (toxin) by eating
those particular ants. Another example is the
moth Utetheisa ornatrix, whose larvae (cater-
pillars) feed on certain plants that contain
pyrrolizidine alkaloids. Because those alka-
loids are extremely bitter tasting and toxic,
spiders that normally prey on them refuse to
eat those Utetheisa ornatrix; even after they
later become adult moths. If those moths
(who consumed those pyrrolizidine alka-
loids as larvae) get caught in the spider’s
web, the spider will cut it out of the web and
release that particular (toxic) moth. Vinca
alkaloids, isolated from the specific plants
that produce them, have been utilized as can-
cer-treating (antitumor) drugs. See also
TOXIN
,
FUNGUS
,
TREMORGENIC INDOLE ALKA-
LOIDS
,
ERGOTAMINE
.
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