"Frontmatter". In: Plant Genomics and Proteomics
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Christopher A. Cullis - Plant Genomics and Proteomics-J. Wiley & Sons (2004)
Arabidopsis, 81
Large-insert vectors, in cloning, 27 Legume Information System, 168, 170 Legumes mutants of, 139–141 nitrogen-fixing bacteria and, 138–139 as sequencing targets, 65 Leucine-rich repeat (LRR) genes, 133–134, 136, 137 Libraries BAC, 28 Cot fractionation-based, 62 EST, 172–173 full-length cDNA, 73, 75 in identifying QTLs, 160 large-insert, 27 methylation restriction, 62 methyl filtration, 61–62 shotgun, 61–62 subtraction, 33–36 Light, plants and, xii Living modified organisms (LMOs), environmental release of, 191, 193–196 Loci. See Quantitative trait loci (QTLs) Long terminal repeats (LTRs), 10 Lotus japonicus, 139, 140 as sequencing target, 65 Lotus tenuis, chromosome variation in, 4, 6–7 Low-copy sequences, DNA variation via, 7–10 LR reaction, 25–27 Luzula, chromosome variation in, 4 Luzula elegans, chromosome variation in, 4, 5 Luzula pilosa, chromosome variation in, 4, 5, 6 Lycopersicon, QTLs in, 156–160 Lycopersicon esculentum, 157, 158–159 Lycopersicon pennellii, 158–159 I N D E X 2 0 9 Lycopersicon pimpinellifolium, 157 Lynx technology, 119 MADS gene family, 98 Maize gene linkage in, 18–19 genome sequencing of, 53 molecular maps for, 149 retrotransposons in, 10–11 as sequencing target, 65 transposable elements in, 57–58 transposon mutagenesis in, 82, 84 MaizeDB database, 168, 170, 183 Mannopine synthase (MAS) promoter, 93, 94 Map-based cloning, 48 Map-based genome sequencing, 49, 50 Mapping, of QTLs, 152–160. See also Genetic maps; Maps; Physical mapping Maps, molecular, 148, 149 Marker-assisted selection (MAS), 148–149, 160–164 Massively parallel signature sequencing (MPSS TM ), 110, 113, 114, 117–119 advantages and disadvantages of, 119–120 Mass spectrometry (MS), 39, 40 in protein identification, 125 Matrix-assisted laser desorption/ionization (MALDI), 39 Matrix-assisted laser desorption/ionization-time of flight (MALDI-TOF), 121 Matrix attachment regions (MARs), 102 Medicago truncatula, 139, 140 as sequencing target, 65 Megablast program, 179 Messenger RNA (mRNA), 75, 120 in cDNA cloning, 32–33 in differential display technology, 36–37 MPSS and, 118 SAGE and, 116 stability of, 99 subtraction libraries and, 33 Metabolites cellular processes and, 107–109 synthesized by plants, xii–xiii Metabolomes, 107–109 Metabolomics, 109 Metaphase, in Luzula species, 5, 6 Methoxyfenozide-inducible GVCfEcR system, 101 Methoxyfenozide-inducible GVOnEcR system, 101 Methylation, 57 Methylation restriction libraries, 62 Methylcytosine (Methyl-C), 57 Methyl filtration genome fractionation via, 57 libraries, 61–62 Microarray hybridization, 48 Microarray technology, 24, 37–38, 96. See also DNA microarrays in expression profiling, 109–110 in plant stress studies, 132, 142–143 Microsatellites, 149, 151 Miller, Webb, 182 Miniature inverted repeat transposable elements (MITES), 11 Minimal information associated with a functional genomics experiment (MIAFGE), 42 Minimum tiling path (MTP) sequencing, 59, 60, 61 Miropeats program, 174, 177, 178 Molecular maps, 148, 149 Monocots, intron-mediated enhancement in, 95 Motif finding, 178 MultiPipMaker program, 182–183 Multiple genomes, consequences of, 16–19 Download 1.13 Mb. Do'stlaringiz bilan baham: |
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