"Frontmatter". In: Plant Genomics and Proteomics
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Christopher A. Cullis - Plant Genomics and Proteomics-J. Wiley & Sons (2004)
Musa, 32
Musa acuminata, 32 Musa balbisiana, 32 Mutagenesis gene identification via, 78–87 insertional, 80–82, 83, 84–85, 138 via RNA interference, 80, 86–87 via TILLING, 80, 82–85 transposon, 82, 84 Mutagens, 70 2 1 0 I N D E X Mutants, of legumes, 139–141. See also Mutagenesis MYB gene family, 97 Mycorrhizal fungi, 138–139 NAC gene family, 97 National Biosafety and Biotechnology Strategy Plan (Zambia), 194 National Center for Biotechnology Information (NCBI), 168, 173 databases available from (table), 176 National Plant Genome Initiative, xiv, 66 NDR1 gene, 135–136 Near isogenic lines (NILs), in QTL identification, 152–155, 160 Nitrogen-fixing bacteria, 138–139 Nonnodulating mutants, of legumes, 139 Nonreciprocal translocations, 14 Normalization, of cDNA libraries, 34 Northern blot, in expression profiling, 109–110 Nuclear DNA, in plants, 1–3 Nuclear isolation, isolating source DNA via, 28 Nucleic acid searches, 183–185 Nucleolar dominance, 16 Nucleosome, 102 Nucleotide sequences, BLAST ® and, 175, 176 Nucleotide-binding leucine-rich repeat (NBS-LRR) genes, 133–134, 136 Oligonucleotides. See also Overgo entries as BAC library probes, 30, 31 in microarrays, 110, 112 1C values, 1–3 Open reading frame X (ORFX), in identifying QTLs, 158–160 Organellar “contamination,” 61 Organ-specific promoters, 148 Orion Genomics, 61 Orthologs, 18 “Overgo oligos,” 30, 31 with BAC contigs, 58 Overgo probes, 58 PaCE clustering tool, 179 PAD4 gene, 136 Paracel TranscriptAssembler TM , 179 Paralogs, 18 PAT1:b-glucuronidase (PAT1:GUS) fusion, 95 Pathogens, xi–xii plant resistance to, 133–138 PBS2 gene, 136 PCR, real-time, 129 PCR amplification, 151 PCYPAC2N vector, 29 Peptides, sequencing of, 38–39, 40, 121, 122 Peronospora parasitica, 135 Pests, 131 PHD file format, 42 Phenotypes, 19 genes and, 147–149 Phenotypic screening, in marker- assisted selection, 160–164 Phrap software, 42–43 Phred software, 42–43 Physical mapping, 51–53, 64–65 Physical maps, in genome sequencing, 49, 50–51 Pinus pinaster, DNA content of, 2–3 Pita protein, 137 Plant breeding, bioethics of, 189–190 Plant databases, critique of, 41–42. See also Databases PlantGDB database, 179, 180 Plant Genome Research Program, 42, 132 Plant genomes. See also Genomes; Plant genomics creating complete sequences of, 47–66 structure of, 1–20 Plant genomics. See also Genomics; Plant genomes bioethics of, 189–198 informatics for, 171 rationale for, ix–xiv Plant roots, interactions of, ix, xi Plants abiotic interactions of, 141–144 annotation of genomes of, 77–78 for BAC libraries, 32 biotic interactions of, 132–141 I N D E X 2 1 1 chromosome variation in, 3–7 complex traits of, 147–164 controlling gene expression in, 89–103 differences between other organisms and, ix–x disease resistance of, 131, 132–138 environmental interactions of, 131–144 EST numbers of selected (table), 74 features of, ix gene spaces of, 66 identifying gene families in, 69–70 proteomics of, 124 recognition of pathogens by, 135 sequence databases for, 65 stress among, 131–132 symbiosis among, 132, 138–141 PlantsP database, 181 PlantsP Kinase Classification (PPC), 181 Plasmid-based vectors, in cloning, 25–27 Plasmids, 126, 127 Polyacrylamide gel electrophoresis (PAGE), in protein separation, 124 Polymorphisms, genetic maps and, 51. Download 1.13 Mb. Do'stlaringiz bilan baham: |
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